Table of Contents |
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awake.sh | Prints a null character ( A SLURM bug can cause an Odyssey interactive session to hang if you step away from the computer for an extended period (more than 30 minutes). |
. bashrc_mitgcm | Customizes your bash Unix environment for the MITgcm. It loads the proper modules needed to run the MITgcm,
To build the MITgcm, we shall use the Intel compilers (13.1), OpenMPI (v1.8.1), and netCDF-4.1.3. |
Next steps
Once you have started an interactive session, you will need to do the following steps:
- Make a working directory where you can compile and run MITgcm
- This step only has to be done once for each simulation type (Hg, PFOS, PCB).
- Or, when you wish start a simulation with a fresh run directory.
- You can also rename an existing simulation directory and create a new directory to save
- NOTE: We recommend doing this step within the interactive session because the file copying process will take the
- This step only has to be done once for each simulation type (Hg, PFOS, PCB).
- Build the MITgcm executable
- Run a MITgcm simulation.